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Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae

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Version 2 2024-08-29, 05:26
Version 1 2023-07-28, 04:44
journal contribution
posted on 2024-08-29, 05:26 authored by Wenjing Zhang, Yundan Liu, Kaiyang Zheng, Jinyan Xing, Qian Li, Chengxiang Gu, Ziyue Wang, Hongbing Shao, Cui Guo, Hui He, Hualong Wang, Yeong Yik Sung, Wen Jye Mok, Li Lian Wong, Yantao Liang, Andrew McMinnAndrew McMinn, Min Wang
The marine bacterial family Oceanospirillaceae, is well-known for its ability to degrade hydrocarbons and for its close association with algal blooms. However, only a few Oceanospirillaceae-infecting phages have been reported thus far. Here, we report on a novel Oceanospirillum phage, namely, vB_OsaM_PD0307, which has a 44,421 bp linear dsDNA genome and is the first myovirus infecting Oceanospirillaceae. A genomic analysis demonstrated that vB_OsaM_PD0307 is a variant of current phage isolates from the NCBI data set but that it has similar genomic features to two high-quality, uncultured viral genomes identified from marine metagenomes. Hence, we propose that vB_OsaM_PD0307 can be classified as the type phage of a new genus, designated Oceanospimyovirus. Additionally, metagenomic read mapping results have further shown that Oceanospimyovirus species are widespread in the global ocean, display distinct biogeographic distributions, and are abundant in polar regions. In summary, our findings expand the current understanding of the genomic characteristics, phylogenetic diversity, and distribution of Oceanospimyovirus phages. IMPORTANCE Oceanospirillum phage vB_OsaM_PD0307 is the first myovirus found to infect Oceanospirillaceae, and it represents a novel abundant viral genus in polar regions. This study provides insights into the genomic, phylogenetic, and ecological characteristics of the new viral genus, namely Oceanospimyovirus.

History

Sub-type

  • Article

Publication title

APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Medium

Print-Electronic

Volume

89

Issue

4

Editors

NR Buan

Pagination

14

eISSN

1098-5336

ISSN

0099-2240

Department/School

Ecology and Biodiversity

Publisher

AMER SOC MICROBIOLOGY

Publication status

  • Published online

Place of publication

United States

Event Venue

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Center for Ocean Carbon Neutrality, Ocean University of China, Qingdao, China.

Rights statement

Copyright © 2023 Zhang et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license